About me

I am a Ph.D student studying at School of Electircal Engineering and Computer Science, Washington State Unversity in Pullman, WA. Currently, I am working with Dr. Ananth Kalyanaraman on High Performance Computing, Computational Biology, and Graph algorithms.

- Curriculum Vitae

Research

- Research Assistant, Washington State University

- Research Intern, Pacific Northwest National Laboratory

- Research Assistant, National E&T Center of HPC, Tongji University

Publications

[2012] C. Wu, A. Kalyanaraman, W. Cannon. pGraph: Efficient parallel construction of large-scale protein sequence homology graphs. IEEE Transactions on Parallel and Distributed Systems (TPDS), doi:10.1109/TPDS.2012.19

[2010] The genome of the domesticated apple (Malus x domestica Borkh.). Nature Genetics, doi:10.1038/ng.654

[2010] C. Wu, A. Kalyanaraman, W. Cannon. A scalable parallel algorithm for large-scale protein sequence homology detection. Proc. 39th International Conference on Parallel Processing  (ICPP'2010), San Diego, CA. September 13-16. pp. 333-342

[2008] C. Wu, A. Kalyanaraman. An efficient parallel approach for identifying protein families in large-scale metagenomic data sets. Proc. ACM/IEEE Supercomputing Conference (SC'08), Austin, TX, November 15-21. pp. 1-10

[2007] C. Wu, A. Kalyanaraman, A. Dhingra. An efficient computational framework for amplifying arbitrarily long conserved DNA sequences. Proc. LSS Computational Systems Bioinformatics (CSB'07), San Diego, CA, August 13-17. More...

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